BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A11LP1|AL425218
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig826 1806 0.0
>3x_Contig826
Length = 2477
Score = 1806 bits (910), Expect = 0.0
Identities = 956/965 (99%), Gaps = 6/965 (0%)
Strand = Plus / Minus
Query: 1 tcaacccatccgatctgtaactgtatgtcgcagtaccggcgatgcaggcatcgc-ggtnc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 1194 tcaacccatccgatctgtaactgtatgtcgcagtaccggcgatgcaggcatcgccggtac 1135
Query: 60 tacctgtattggaataattcgtagaatcacgtgactgctgcttcgcactaccgccaccac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 tacctgtattggaataattcgtagaatcacgtgactgctgcttcgcactaccgccaccac 1075
Query: 120 caccgctattcgatctgaacaactctttatacaccaaaaacttaccaacaacccttgacg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 caccgctattcgatctgaacaactctttatacaccaaaaacttaccaacaacccttgacg 1015
Query: 180 gagaccaggggatcccgtcagtccatcgtttaataccggatttttcctcgatgaaaacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gagaccaggggatcccgtcagtccatcgtttaataccggatttttcctcgatgaaaacaa 955
Query: 240 aaatattgcccgaacaaataagcttcggtctttcaatttcgtatggtcttcgagacacag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 aaatattgcccgaacaaataagcttcggtctttcaatttcgtatggtcttcgagacacag 895
Query: 300 aatggagatctccgttcaaaacacattctactactttcaaagcgtcatcgttattttcaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 aatggagatctccgttcaaaacacattctactactttcaaagcgtcatcgttattttcaa 835
Query: 360 tgtaagctctattgagcgttggcttgacgtccatatgctaaaatgacgggaaaacgggaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tgtaagctctattgagcgttggcttgacgtccatatgctaaaatgacgggaaaacgggaa 775
Query: 420 aaacagattaaaacttaaaataaaaacaacgacaacagaaaacaacgatatttgtgtgtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aaacagattaaaacttaaaataaaaacaacgacaacagaaaacaacgatatttgtgtgtg 715
Query: 480 ccttgttttatggcctgtatgaaataacctatgctgacgacgtcttcttgctcatggatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccttgttttatggcctgtatgaaataacctatgctgacgacgtcttcttgctcatggatc 655
Query: 540 tgatcctagctgtattctttgaaacagggtccaatgcgtctaatataaaggaacctgaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgatcctagctgtattctttgaaacagggtccaatgcgtctaatataaaggaacctgaat 595
Query: 600 tggaaagtggcgcgagagggatgtgaaaaacgaaccaaaactgtggcaaacaccagggag 659
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggaaagtggcgc-agagggatgtgaaaaacgaaccaaaactgtggcaaacaccagggag 536
Query: 660 aagtagtaacttctatttgatatgatgtaatatgatctatatatatatatccatatatat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagtagtaacttctatttgatatgatgtaatatgatctatatatatatatccatatatat 476
Query: 720 ttatattcatatttacataattatatacatatcgtatcatttcaaaatcaacacatagcg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttatattcatatttacataattatatacatatcgtatcatttcaaaatcaacacatagcg 416
Query: 780 aaagggratgatgcataagagaacaaagcagagcatacccagggccagaaactcatctgg 839
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaagggaatgatgcataagagaacaaagcagagcatacccagggccagaaactcatctgg 356
Query: 840 aaaa-cccatatacacagcacagaaccatgcacatgaaccgaaagg-aaaacagaataca 897
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 355 aaaaccccatatacacagcacagaaccatgcacatgaaccgaaaggaaaaacagaataca 296
Query: 898 gaatggaacgagaagtcaaaaagg-aaacagaatgggaagtctcttagaagag-actcag 955
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 295 gaatggaacgagaagtcaaaaaggaaaacagaatgggaagtctcttagaagagaactcag 236
Query: 956 twaga 960
| |||
Sbjct: 235 taaga 231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,615
Number of Sequences: 1807
Number of extensions: 10615
Number of successful extensions: 406
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)